News

ProteoPy preprint on bioRxiv

1 April 2026

We are excited to announce that the ProteoPy manuscript is now available as a preprint on bioRxiv:

Fichtner ID, Temesvari-Nagy L, Sahm F, Gerstung M, Bludau I. ProteoPy: an AnnData-based framework for integrated proteomics analysis. bioRxiv (2026). doi:10.64898/2026.03.31.715273

To be notified of new revisions, visit the bioRxiv article page and click the Follow this preprint button to subscribe to updates.

Introducing Our Newest Developer

3 March 2026

The ProteoPy team is growing! We are happy to welcome Levente Temesvári-Nagy as a developer and maintainer. Levente is pursuing his Master’s degree in Molecular Biotechnology with a specialization in Bioinformatics at Heidelberg University, Germany. He is passionate about biomedical omics technologies, including proteomics.

Welcome aboard, Levente!

ProteoPy v0.1.0 Released

9 February 2026

We are thrilled to announce the first public release of ProteoPy! Our goal is to make proteomics data analysis accessible to everyone — whether you are a seasoned bioinformatician or a bench scientist exploring your data for the first time. We hope ProteoPy helps you get from raw results to biological insight with minimal friction.

See the installation guides and tutorials to get started.

See the full Changelog for detailed release history.